Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 AC131212.1-201ENST00000613771 668 ntBASIC19.16■□□□□ 0.66
HLA-DPB1P04440 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DPB1P04440 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DPB1P04440 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DPB1P04440 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DPB1P04440 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DPB1P04440 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.14■□□□□ 0.65
HLA-DPB1P04440 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DPB1P04440 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 AL157384.1-201ENST00000445995 2473 ntBASIC19.13■□□□□ 0.65
HLA-DPB1P04440 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPB1P04440 AF106564.1-201ENST00000607058 2553 ntBASIC19.13■□□□□ 0.65
HLA-DPB1P04440 AC092667.1-201ENST00000434301 2586 ntBASIC19.12■□□□□ 0.65
HLA-DPB1P04440 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DPB1P04440 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms