Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.69■□□□□ 0.58
LCATP04180 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.69■□□□□ 0.58
LCATP04180 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LCATP04180 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.69■□□□□ 0.58
LCATP04180 AC110285.6-201ENST00000617652 491 ntBASIC18.69■□□□□ 0.58
LCATP04180 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCATP04180 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LCATP04180 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.68■□□□□ 0.58
LCATP04180 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.68■□□□□ 0.58
LCATP04180 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
LCATP04180 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.68■□□□□ 0.58
LCATP04180 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.68■□□□□ 0.58
LCATP04180 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
LCATP04180 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LCATP04180 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.68■□□□□ 0.58
LCATP04180 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCATP04180 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 EDA-201ENST00000338901 1233 ntBASIC18.67■□□□□ 0.58
LCATP04180 AC099791.1-201ENST00000416440 715 ntBASIC18.67■□□□□ 0.58
LCATP04180 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LCATP04180 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.67■□□□□ 0.58
LCATP04180 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.67■□□□□ 0.58
LCATP04180 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.67■□□□□ 0.58
LCATP04180 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.67■□□□□ 0.58
LCATP04180 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.67■□□□□ 0.58
LCATP04180 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCATP04180 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LCATP04180 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LCATP04180 AC010542.4-201ENST00000563151 1910 ntBASIC18.66■□□□□ 0.58
LCATP04180 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LCATP04180 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.66■□□□□ 0.58
LCATP04180 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.66■□□□□ 0.58
LCATP04180 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.66■□□□□ 0.58
LCATP04180 AC027682.1-201ENST00000562846 899 ntBASIC18.66■□□□□ 0.58
LCATP04180 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.66■□□□□ 0.58
LCATP04180 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.66■□□□□ 0.58
LCATP04180 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.66■□□□□ 0.58
LCATP04180 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LCATP04180 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.66■□□□□ 0.58
LCATP04180 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCATP04180 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCATP04180 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.65■□□□□ 0.58
LCATP04180 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
LCATP04180 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.65■□□□□ 0.58
LCATP04180 AL034346.1-201ENST00000568244 1277 ntBASIC18.65■□□□□ 0.58
LCATP04180 AL355001.2-201ENST00000620617 1191 ntBASIC18.65■□□□□ 0.58
LCATP04180 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LCATP04180 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.65■□□□□ 0.58
LCATP04180 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.65■□□□□ 0.58
LCATP04180 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCATP04180 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.64■□□□□ 0.58
LCATP04180 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LCATP04180 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCATP04180 AP004607.7-201ENST00000527152 1677 ntBASIC18.64■□□□□ 0.57
LCATP04180 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCATP04180 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCATP04180 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCATP04180 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.64■□□□□ 0.57
LCATP04180 IGHV3-19-201ENST00000521488 291 ntBASIC18.64■□□□□ 0.57
LCATP04180 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.64■□□□□ 0.57
LCATP04180 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.64■□□□□ 0.57
LCATP04180 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LCATP04180 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCATP04180 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms