Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND1P03886 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND1P03886 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MT-ND1P03886 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND1P03886 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MT-ND1P03886 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-ND1P03886 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-ND1P03886 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.13■□□□□ 0.81
MT-ND1P03886 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND1P03886 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MT-ND1P03886 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
MT-ND1P03886 AC009299.2-201ENST00000482477 511 ntBASIC20.12■□□□□ 0.81
MT-ND1P03886 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.12■□□□□ 0.81
MT-ND1P03886 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MT-ND1P03886 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND1P03886 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MT-ND1P03886 LINC01521-201ENST00000504184 1943 ntBASIC20.12■□□□□ 0.81
MT-ND1P03886 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.12■□□□□ 0.81
MT-ND1P03886 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.11■□□□□ 0.81
MT-ND1P03886 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.11■□□□□ 0.81
MT-ND1P03886 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MT-ND1P03886 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.11■□□□□ 0.81
MT-ND1P03886 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 LINC01006-201ENST00000333319 2292 ntBASIC20.11■□□□□ 0.81
MT-ND1P03886 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.11■□□□□ 0.81
MT-ND1P03886 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND1P03886 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
MT-ND1P03886 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MT-ND1P03886 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
MT-ND1P03886 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 AC010997.5-201ENST00000609182 354 ntBASIC20.1■□□□□ 0.81
MT-ND1P03886 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND1P03886 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.1■□□□□ 0.81
MT-ND1P03886 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 AC009102.2-201ENST00000606772 1639 ntBASIC20.09■□□□□ 0.81
MT-ND1P03886 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MT-ND1P03886 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
MT-ND1P03886 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.09■□□□□ 0.81
MT-ND1P03886 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.09■□□□□ 0.81
MT-ND1P03886 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.09■□□□□ 0.81
MT-ND1P03886 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MT-ND1P03886 AL451085.2-201ENST00000605085 799 ntBASIC20.09■□□□□ 0.81
MT-ND1P03886 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MT-ND1P03886 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MT-ND1P03886 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND1P03886 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
MT-ND1P03886 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.08■□□□□ 0.81
MT-ND1P03886 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.08■□□□□ 0.81
MT-ND1P03886 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.08■□□□□ 0.81
MT-ND1P03886 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND1P03886 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MT-ND1P03886 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MT-ND1P03886 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
MT-ND1P03886 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND1P03886 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND1P03886 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND1P03886 TSPY9P-201ENST00000440215 945 ntBASIC20.07■□□□□ 0.8
MT-ND1P03886 TSPY11P-201ENST00000442607 1045 ntBASIC20.07■□□□□ 0.8
MT-ND1P03886 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-ND1P03886 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND1P03886 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms