Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TGFAP01135 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.63■□□□□ 0.41
TGFAP01135 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.63■□□□□ 0.41
TGFAP01135 AC069152.1-201ENST00000438030 544 ntBASIC17.63■□□□□ 0.41
TGFAP01135 FAM201B-201ENST00000458407 597 ntBASIC17.63■□□□□ 0.41
TGFAP01135 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.63■□□□□ 0.41
TGFAP01135 AC133552.2-202ENST00000575694 574 ntBASIC17.63■□□□□ 0.41
TGFAP01135 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TGFAP01135 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.63■□□□□ 0.41
TGFAP01135 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.63■□□□□ 0.41
TGFAP01135 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
TGFAP01135 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TGFAP01135 CNN2P6-201ENST00000439038 900 ntBASIC17.62■□□□□ 0.41
TGFAP01135 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TGFAP01135 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.62■□□□□ 0.41
TGFAP01135 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.62■□□□□ 0.41
TGFAP01135 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.62■□□□□ 0.41
TGFAP01135 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TGFAP01135 AL034346.1-201ENST00000568244 1277 ntBASIC17.62■□□□□ 0.41
TGFAP01135 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TGFAP01135 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.62■□□□□ 0.41
TGFAP01135 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TGFAP01135 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TGFAP01135 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TGFAP01135 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TGFAP01135 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.61■□□□□ 0.41
TGFAP01135 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TGFAP01135 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.61■□□□□ 0.41
TGFAP01135 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.61■□□□□ 0.41
TGFAP01135 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TGFAP01135 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TGFAP01135 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TGFAP01135 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TGFAP01135 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TGFAP01135 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TGFAP01135 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.6■□□□□ 0.41
TGFAP01135 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.6■□□□□ 0.41
TGFAP01135 AC013268.1-206ENST00000638368 961 ntBASIC17.6■□□□□ 0.41
TGFAP01135 AC112229.1-201ENST00000639295 961 ntBASIC17.6■□□□□ 0.41
TGFAP01135 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TGFAP01135 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.6■□□□□ 0.41
TGFAP01135 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TGFAP01135 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.59■□□□□ 0.41
TGFAP01135 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.59■□□□□ 0.41
TGFAP01135 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TGFAP01135 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.59■□□□□ 0.41
TGFAP01135 AC066615.1-201ENST00000640911 628 ntBASIC17.59■□□□□ 0.41
TGFAP01135 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TGFAP01135 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TGFAP01135 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TGFAP01135 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.58■□□□□ 0.41
TGFAP01135 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TGFAP01135 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TGFAP01135 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TGFAP01135 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TGFAP01135 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TGFAP01135 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.58■□□□□ 0.4
TGFAP01135 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.58■□□□□ 0.4
TGFAP01135 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.58■□□□□ 0.4
TGFAP01135 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.58■□□□□ 0.4
TGFAP01135 TERF1P5-201ENST00000477545 1207 ntBASIC17.58■□□□□ 0.4
TGFAP01135 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TGFAP01135 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.58■□□□□ 0.4
TGFAP01135 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.58■□□□□ 0.4
TGFAP01135 MIR4651-201ENST00000582622 73 ntBASIC17.58■□□□□ 0.4
TGFAP01135 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
TGFAP01135 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.58■□□□□ 0.4
TGFAP01135 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.58■□□□□ 0.4
TGFAP01135 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.58■□□□□ 0.4
TGFAP01135 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TGFAP01135 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms