Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAF4O95104 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCAF4O95104 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAF4O95104 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAF4O95104 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAF4O95104 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAF4O95104 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAF4O95104 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAF4O95104 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAF4O95104 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAF4O95104 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAF4O95104 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAF4O95104 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAF4O95104 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAF4O95104 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAF4O95104 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.41■□□□□ 0.38
SCAF4O95104 GUSBP5-201ENST00000418136 578 ntBASIC17.41■□□□□ 0.38
SCAF4O95104 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 CA15P2-201ENST00000611168 834 ntBASIC17.41■□□□□ 0.38
SCAF4O95104 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SCAF4O95104 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAF4O95104 LINC01521-201ENST00000504184 1943 ntBASIC17.41■□□□□ 0.38
SCAF4O95104 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAF4O95104 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SCAF4O95104 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.4■□□□□ 0.38
SCAF4O95104 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAF4O95104 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAF4O95104 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAF4O95104 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SCAF4O95104 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SCAF4O95104 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAF4O95104 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCAF4O95104 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCAF4O95104 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.39■□□□□ 0.38
SCAF4O95104 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SCAF4O95104 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAF4O95104 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAF4O95104 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAF4O95104 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAF4O95104 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCAF4O95104 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAF4O95104 SNX5-217ENST00000606557 1087 ntBASIC17.39■□□□□ 0.37
SCAF4O95104 AC092028.1-203ENST00000608262 953 ntBASIC17.39■□□□□ 0.37
SCAF4O95104 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAF4O95104 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAF4O95104 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAF4O95104 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SCAF4O95104 AL157384.1-201ENST00000445995 2473 ntBASIC17.38■□□□□ 0.37
SCAF4O95104 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SCAF4O95104 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SCAF4O95104 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAF4O95104 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SCAF4O95104 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCAF4O95104 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SCAF4O95104 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAF4O95104 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAF4O95104 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms