Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.75■■□□□ 1.07
PMPCBO75439 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PMPCBO75439 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.75■■□□□ 1.07
PMPCBO75439 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.75■■□□□ 1.07
PMPCBO75439 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.75■■□□□ 1.07
PMPCBO75439 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PMPCBO75439 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PMPCBO75439 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.74■■□□□ 1.07
PMPCBO75439 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 MIR572-201ENST00000384983 95 ntBASIC21.74■■□□□ 1.07
PMPCBO75439 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PMPCBO75439 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PMPCBO75439 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PMPCBO75439 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMPCBO75439 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.74■■□□□ 1.07
PMPCBO75439 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PMPCBO75439 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.73■■□□□ 1.07
PMPCBO75439 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PMPCBO75439 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
PMPCBO75439 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.73■■□□□ 1.07
PMPCBO75439 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 AL034346.1-201ENST00000568244 1277 ntBASIC21.73■■□□□ 1.07
PMPCBO75439 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.73■■□□□ 1.07
PMPCBO75439 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PMPCBO75439 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.73■■□□□ 1.07
PMPCBO75439 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMPCBO75439 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.72■■□□□ 1.07
PMPCBO75439 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PMPCBO75439 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMPCBO75439 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMPCBO75439 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMPCBO75439 AC105265.2-201ENST00000467189 838 ntBASIC21.72■■□□□ 1.07
PMPCBO75439 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMPCBO75439 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.72■■□□□ 1.07
PMPCBO75439 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMPCBO75439 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.71■■□□□ 1.07
PMPCBO75439 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.71■■□□□ 1.07
PMPCBO75439 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.71■■□□□ 1.07
PMPCBO75439 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.71■■□□□ 1.07
PMPCBO75439 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.71■■□□□ 1.07
PMPCBO75439 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMPCBO75439 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
PMPCBO75439 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.7■■□□□ 1.06
PMPCBO75439 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.7■■□□□ 1.06
PMPCBO75439 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.7■■□□□ 1.06
PMPCBO75439 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.7■■□□□ 1.06
PMPCBO75439 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMPCBO75439 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMPCBO75439 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.69■■□□□ 1.06
PMPCBO75439 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMPCBO75439 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMPCBO75439 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PMPCBO75439 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.69■■□□□ 1.06
PMPCBO75439 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.69■■□□□ 1.06
PMPCBO75439 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PMPCBO75439 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.69■■□□□ 1.06
PMPCBO75439 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PMPCBO75439 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.68■■□□□ 1.06
PMPCBO75439 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PMPCBO75439 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.68■■□□□ 1.06
PMPCBO75439 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMPCBO75439 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms