Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD6O75340 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDCD6O75340 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD6O75340 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD6O75340 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD6O75340 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD6O75340 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
PDCD6O75340 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD6O75340 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD6O75340 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.05■□□□□ 0.48
PDCD6O75340 AL512631.2-201ENST00000604634 923 ntBASIC18.05■□□□□ 0.48
PDCD6O75340 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD6O75340 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD6O75340 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.04■□□□□ 0.48
PDCD6O75340 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.04■□□□□ 0.48
PDCD6O75340 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.04■□□□□ 0.48
PDCD6O75340 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 AL034346.1-201ENST00000568244 1277 ntBASIC18.04■□□□□ 0.48
PDCD6O75340 AC010525.1-201ENST00000585559 441 ntBASIC18.04■□□□□ 0.48
PDCD6O75340 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDCD6O75340 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD6O75340 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.04■□□□□ 0.48
PDCD6O75340 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDCD6O75340 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.03■□□□□ 0.48
PDCD6O75340 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PDCD6O75340 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.03■□□□□ 0.48
PDCD6O75340 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD6O75340 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD6O75340 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PDCD6O75340 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDCD6O75340 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
PDCD6O75340 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD6O75340 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD6O75340 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDCD6O75340 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD6O75340 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDCD6O75340 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.02■□□□□ 0.48
PDCD6O75340 AL138724.1-201ENST00000606771 1088 ntBASIC18.02■□□□□ 0.48
PDCD6O75340 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD6O75340 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDCD6O75340 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 AF106564.1-201ENST00000607058 2553 ntBASIC18.01■□□□□ 0.47
PDCD6O75340 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.01■□□□□ 0.47
PDCD6O75340 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDCD6O75340 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.01■□□□□ 0.47
PDCD6O75340 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDCD6O75340 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.01■□□□□ 0.47
PDCD6O75340 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDCD6O75340 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDCD6O75340 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD6O75340 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD6O75340 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18■□□□□ 0.47
PDCD6O75340 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD6O75340 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD6O75340 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PDCD6O75340 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDCD6O75340 SYT6-210ENST00000641643 1587 ntBASIC18■□□□□ 0.47
PDCD6O75340 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.99■□□□□ 0.47
PDCD6O75340 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.99■□□□□ 0.47
PDCD6O75340 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 SERBP1P1-201ENST00000396021 1160 ntBASIC17.99■□□□□ 0.47
PDCD6O75340 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDCD6O75340 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.99■□□□□ 0.47
PDCD6O75340 DUX4L19-201ENST00000557448 1267 ntBASIC17.99■□□□□ 0.47
PDCD6O75340 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.99■□□□□ 0.47
PDCD6O75340 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.99■□□□□ 0.47
PDCD6O75340 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PDCD6O75340 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms