Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF4O60810 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF4O60810 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF4O60810 AC244015.2-201ENST00000616358 1861 ntBASIC20.66■□□□□ 0.9
PRAMEF4O60810 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF4O60810 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF4O60810 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF4O60810 AL137060.1-201ENST00000618151 2648 ntBASIC20.64■□□□□ 0.9
PRAMEF4O60810 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF4O60810 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF4O60810 AC005837.3-201ENST00000612163 286 ntBASIC20.64■□□□□ 0.89
PRAMEF4O60810 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF4O60810 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PRAMEF4O60810 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF4O60810 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEF4O60810 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF4O60810 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.63■□□□□ 0.89
PRAMEF4O60810 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.63■□□□□ 0.89
PRAMEF4O60810 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF4O60810 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 AC003102.1-202ENST00000563394 1796 ntBASIC20.63■□□□□ 0.89
PRAMEF4O60810 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF4O60810 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF4O60810 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF4O60810 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 MIR572-201ENST00000384983 95 ntBASIC20.62■□□□□ 0.89
PRAMEF4O60810 MIR638-201ENST00000385237 100 ntBASIC20.62■□□□□ 0.89
PRAMEF4O60810 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF4O60810 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF4O60810 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 AL034346.1-201ENST00000568244 1277 ntBASIC20.61■□□□□ 0.89
PRAMEF4O60810 AC105233.4-201ENST00000642045 216 ntBASIC20.61■□□□□ 0.89
PRAMEF4O60810 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF4O60810 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF4O60810 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF4O60810 AP006587.3-201ENST00000525742 1516 ntBASIC20.6■□□□□ 0.89
PRAMEF4O60810 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.6■□□□□ 0.89
PRAMEF4O60810 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.6■□□□□ 0.89
PRAMEF4O60810 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 AC142381.2-201ENST00000566120 298 ntBASIC20.6■□□□□ 0.89
PRAMEF4O60810 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRAMEF4O60810 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF4O60810 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF4O60810 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF4O60810 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms