Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CCNT1O60563 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.35■■□□□ 1.49
CCNT1O60563 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CCNT1O60563 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.35■■□□□ 1.49
CCNT1O60563 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.35■■□□□ 1.49
CCNT1O60563 TPRG1LP1-201ENST00000598702 760 ntBASIC24.35■■□□□ 1.49
CCNT1O60563 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCNT1O60563 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CCNT1O60563 AP006587.3-201ENST00000525742 1516 ntBASIC24.35■■□□□ 1.49
CCNT1O60563 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 AC005224.4-201ENST00000583262 1652 ntBASIC24.34■■□□□ 1.49
CCNT1O60563 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNT1O60563 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.34■■□□□ 1.49
CCNT1O60563 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.34■■□□□ 1.49
CCNT1O60563 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.34■■□□□ 1.49
CCNT1O60563 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.34■■□□□ 1.49
CCNT1O60563 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNT1O60563 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.33■■□□□ 1.49
CCNT1O60563 YBX1P1-201ENST00000445822 960 ntBASIC24.33■■□□□ 1.49
CCNT1O60563 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNT1O60563 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
CCNT1O60563 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNT1O60563 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CCNT1O60563 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNT1O60563 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNT1O60563 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CCNT1O60563 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNT1O60563 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNT1O60563 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.31■■□□□ 1.48
CCNT1O60563 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNT1O60563 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 LINC00565-201ENST00000562710 2331 ntBASIC24.31■■□□□ 1.48
CCNT1O60563 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNT1O60563 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CCNT1O60563 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNT1O60563 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNT1O60563 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CCNT1O60563 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.3■■□□□ 1.48
CCNT1O60563 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 AC123595.1-201ENST00000440769 1046 ntBASIC24.3■■□□□ 1.48
CCNT1O60563 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CCNT1O60563 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.3■■□□□ 1.48
CCNT1O60563 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNT1O60563 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.3■■□□□ 1.48
CCNT1O60563 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.3■■□□□ 1.48
CCNT1O60563 AC055733.4-201ENST00000638462 1354 ntBASIC24.29■■□□□ 1.48
CCNT1O60563 LINC02228-203ENST00000641970 1355 ntBASIC24.29■■□□□ 1.48
CCNT1O60563 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCNT1O60563 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCNT1O60563 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CCNT1O60563 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CCNT1O60563 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CCNT1O60563 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.29■■□□□ 1.48
CCNT1O60563 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.29■■□□□ 1.48
CCNT1O60563 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.29■■□□□ 1.48
CCNT1O60563 AC010542.4-201ENST00000563151 1910 ntBASIC24.29■■□□□ 1.48
CCNT1O60563 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CCNT1O60563 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
CCNT1O60563 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.29■■□□□ 1.48
CCNT1O60563 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCNT1O60563 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCNT1O60563 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CCNT1O60563 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.28■■□□□ 1.48
CCNT1O60563 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCNT1O60563 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.28■■□□□ 1.48
CCNT1O60563 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCNT1O60563 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCNT1O60563 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CCNT1O60563 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.28■■□□□ 1.48
CCNT1O60563 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms