Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.85■□□□□ 0.61
GMDSO60547 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GMDSO60547 SYT6-210ENST00000641643 1587 ntBASIC18.85■□□□□ 0.61
GMDSO60547 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
GMDSO60547 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
GMDSO60547 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
GMDSO60547 MIR3181-201ENST00000578512 73 ntBASIC18.84■□□□□ 0.61
GMDSO60547 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
GMDSO60547 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GMDSO60547 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GMDSO60547 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GMDSO60547 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.83■□□□□ 0.61
GMDSO60547 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GMDSO60547 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GMDSO60547 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.83■□□□□ 0.61
GMDSO60547 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GMDSO60547 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
GMDSO60547 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GMDSO60547 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
GMDSO60547 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GMDSO60547 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GMDSO60547 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.83■□□□□ 0.6
GMDSO60547 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.83■□□□□ 0.6
GMDSO60547 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GMDSO60547 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GMDSO60547 AC133637.1-201ENST00000624115 1537 ntBASIC18.83■□□□□ 0.6
GMDSO60547 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GMDSO60547 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GMDSO60547 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
GMDSO60547 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GMDSO60547 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
GMDSO60547 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.82■□□□□ 0.6
GMDSO60547 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GMDSO60547 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GMDSO60547 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
GMDSO60547 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
GMDSO60547 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
GMDSO60547 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
GMDSO60547 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.81■□□□□ 0.6
GMDSO60547 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.81■□□□□ 0.6
GMDSO60547 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
GMDSO60547 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GMDSO60547 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.8■□□□□ 0.6
GMDSO60547 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GMDSO60547 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.8■□□□□ 0.6
GMDSO60547 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GMDSO60547 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
GMDSO60547 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GMDSO60547 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
GMDSO60547 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GMDSO60547 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GMDSO60547 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
GMDSO60547 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms