Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LCMT2O60294 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.51■□□□□ 0.87
LCMT2O60294 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.51■□□□□ 0.87
LCMT2O60294 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.51■□□□□ 0.87
LCMT2O60294 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.51■□□□□ 0.87
LCMT2O60294 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LCMT2O60294 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LCMT2O60294 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.51■□□□□ 0.87
LCMT2O60294 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.51■□□□□ 0.87
LCMT2O60294 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LCMT2O60294 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LCMT2O60294 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCMT2O60294 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCMT2O60294 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.5■□□□□ 0.87
LCMT2O60294 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.5■□□□□ 0.87
LCMT2O60294 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LCMT2O60294 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.5■□□□□ 0.87
LCMT2O60294 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 LINC00565-201ENST00000562710 2331 ntBASIC20.5■□□□□ 0.87
LCMT2O60294 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.5■□□□□ 0.87
LCMT2O60294 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LCMT2O60294 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LCMT2O60294 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 AC055733.4-201ENST00000638462 1354 ntBASIC20.49■□□□□ 0.87
LCMT2O60294 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.49■□□□□ 0.87
LCMT2O60294 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.49■□□□□ 0.87
LCMT2O60294 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.49■□□□□ 0.87
LCMT2O60294 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LCMT2O60294 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCMT2O60294 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.49■□□□□ 0.87
LCMT2O60294 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.48■□□□□ 0.87
LCMT2O60294 AP006587.3-201ENST00000525742 1516 ntBASIC20.48■□□□□ 0.87
LCMT2O60294 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
LCMT2O60294 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LCMT2O60294 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.48■□□□□ 0.87
LCMT2O60294 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.48■□□□□ 0.87
LCMT2O60294 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.48■□□□□ 0.87
LCMT2O60294 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.48■□□□□ 0.87
LCMT2O60294 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LCMT2O60294 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCMT2O60294 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.48■□□□□ 0.87
LCMT2O60294 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 AC010542.4-201ENST00000563151 1910 ntBASIC20.47■□□□□ 0.87
LCMT2O60294 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LCMT2O60294 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LCMT2O60294 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
LCMT2O60294 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.47■□□□□ 0.87
LCMT2O60294 AC123595.1-201ENST00000440769 1046 ntBASIC20.47■□□□□ 0.87
LCMT2O60294 YBX1P1-201ENST00000445822 960 ntBASIC20.47■□□□□ 0.87
LCMT2O60294 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LCMT2O60294 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.47■□□□□ 0.87
LCMT2O60294 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LCMT2O60294 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCMT2O60294 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LCMT2O60294 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LCMT2O60294 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.46■□□□□ 0.87
LCMT2O60294 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.46■□□□□ 0.87
LCMT2O60294 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.46■□□□□ 0.87
LCMT2O60294 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.46■□□□□ 0.87
LCMT2O60294 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCMT2O60294 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.45■□□□□ 0.86
LCMT2O60294 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.45■□□□□ 0.86
LCMT2O60294 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.45■□□□□ 0.86
LCMT2O60294 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 AC003102.1-202ENST00000563394 1796 ntBASIC20.45■□□□□ 0.86
LCMT2O60294 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCMT2O60294 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.45■□□□□ 0.86
LCMT2O60294 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms