Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH7O60245 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 AP004607.7-201ENST00000527152 1677 ntBASIC20.43■□□□□ 0.86
PCDH7O60245 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH7O60245 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDH7O60245 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH7O60245 AC126544.1-201ENST00000580842 1059 ntBASIC20.43■□□□□ 0.86
PCDH7O60245 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDH7O60245 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH7O60245 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDH7O60245 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PCDH7O60245 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH7O60245 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
PCDH7O60245 PBX2P1-201ENST00000493219 1291 ntBASIC20.42■□□□□ 0.86
PCDH7O60245 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PCDH7O60245 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH7O60245 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH7O60245 AC026310.3-201ENST00000625186 2373 ntBASIC20.42■□□□□ 0.86
PCDH7O60245 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDH7O60245 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDH7O60245 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDH7O60245 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.41■□□□□ 0.86
PCDH7O60245 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH7O60245 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
PCDH7O60245 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH7O60245 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDH7O60245 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH7O60245 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCDH7O60245 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH7O60245 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH7O60245 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PCDH7O60245 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PCDH7O60245 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH7O60245 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH7O60245 AC104564.3-201ENST00000582367 638 ntBASIC20.4■□□□□ 0.86
PCDH7O60245 AC008764.7-201ENST00000593779 1081 ntBASIC20.4■□□□□ 0.86
PCDH7O60245 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDH7O60245 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH7O60245 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDH7O60245 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH7O60245 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PCDH7O60245 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH7O60245 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH7O60245 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH7O60245 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
PCDH7O60245 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH7O60245 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 IGHV3-19-201ENST00000521488 291 ntBASIC20.39■□□□□ 0.85
PCDH7O60245 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDH7O60245 AC133561.4-201ENST00000566112 224 ntBASIC20.39■□□□□ 0.85
PCDH7O60245 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 AC106739.1-201ENST00000617035 715 ntBASIC20.39■□□□□ 0.85
PCDH7O60245 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDH7O60245 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH7O60245 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH7O60245 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH7O60245 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH7O60245 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH7O60245 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDH7O60245 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH7O60245 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH7O60245 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.38■□□□□ 0.85
PCDH7O60245 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDH7O60245 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH7O60245 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH7O60245 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH7O60245 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH7O60245 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms