Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.56■■■□□ 2.48
VGFO15240 AC098934.4-201ENST00000564127 592 ntBASIC30.56■■■□□ 2.48
VGFO15240 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.56■■■□□ 2.48
VGFO15240 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VGFO15240 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
VGFO15240 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
VGFO15240 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
VGFO15240 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
VGFO15240 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.55■■■□□ 2.48
VGFO15240 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.55■■■□□ 2.48
VGFO15240 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
VGFO15240 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.55■■■□□ 2.48
VGFO15240 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.55■■■□□ 2.48
VGFO15240 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.55■■■□□ 2.48
VGFO15240 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
VGFO15240 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VGFO15240 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
VGFO15240 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
VGFO15240 CYP2T1P-201ENST00000432607 1285 ntBASIC30.54■■■□□ 2.48
VGFO15240 MIR4758-201ENST00000577688 71 ntBASIC30.54■■■□□ 2.48
VGFO15240 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.54■■■□□ 2.48
VGFO15240 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.53■■■□□ 2.48
VGFO15240 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.53■■■□□ 2.48
VGFO15240 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.53■■■□□ 2.48
VGFO15240 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.53■■■□□ 2.48
VGFO15240 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
VGFO15240 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
VGFO15240 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.52■■■□□ 2.48
VGFO15240 OR10C1-204ENST00000622521 1039 ntBASIC30.52■■■□□ 2.48
VGFO15240 AC066615.1-201ENST00000640911 628 ntBASIC30.52■■■□□ 2.48
VGFO15240 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
VGFO15240 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
VGFO15240 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
VGFO15240 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.51■■■□□ 2.47
VGFO15240 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.51■■■□□ 2.47
VGFO15240 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.51■■■□□ 2.47
VGFO15240 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
VGFO15240 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.51■■■□□ 2.47
VGFO15240 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
VGFO15240 MIPEPP3-201ENST00000412105 444 ntBASIC30.5■■■□□ 2.47
VGFO15240 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.5■■■□□ 2.47
VGFO15240 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.5■■■□□ 2.47
VGFO15240 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.5■■■□□ 2.47
VGFO15240 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.5■■■□□ 2.47
VGFO15240 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
VGFO15240 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
VGFO15240 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
VGFO15240 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 AL512625.2-201ENST00000417533 625 ntBASIC30.49■■■□□ 2.47
VGFO15240 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.49■■■□□ 2.47
VGFO15240 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.49■■■□□ 2.47
VGFO15240 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 AC137767.1-201ENST00000602918 1920 ntBASIC30.49■■■□□ 2.47
VGFO15240 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
VGFO15240 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
VGFO15240 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
VGFO15240 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
VGFO15240 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.48■■■□□ 2.47
VGFO15240 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
VGFO15240 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
VGFO15240 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.48■■■□□ 2.47
VGFO15240 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
VGFO15240 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.48■■■□□ 2.47
VGFO15240 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
VGFO15240 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VGFO15240 MKRN4P-201ENST00000444706 1521 ntBASIC30.47■■■□□ 2.47
VGFO15240 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VGFO15240 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
VGFO15240 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.47■■■□□ 2.47
VGFO15240 FAM201B-201ENST00000458407 597 ntBASIC30.47■■■□□ 2.47
VGFO15240 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
VGFO15240 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC30.47■■■□□ 2.47
VGFO15240 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC30.47■■■□□ 2.47
VGFO15240 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
VGFO15240 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VGFO15240 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.47■■■□□ 2.47
VGFO15240 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
VGFO15240 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
VGFO15240 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.46■■■□□ 2.47
VGFO15240 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.46■■■□□ 2.47
VGFO15240 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VGFO15240 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
VGFO15240 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms