Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC35.35■■■■□ 3.25
CHD1O14646 GATS-209ENST00000454084 1030 ntTSL 3 BASIC35.35■■■■□ 3.25
CHD1O14646 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC35.35■■■■□ 3.25
CHD1O14646 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC35.35■■■■□ 3.25
CHD1O14646 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CHD1O14646 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CHD1O14646 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CHD1O14646 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
CHD1O14646 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CHD1O14646 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CHD1O14646 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC35.34■■■■□ 3.25
CHD1O14646 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC35.34■■■■□ 3.25
CHD1O14646 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC35.34■■■■□ 3.25
CHD1O14646 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CHD1O14646 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CHD1O14646 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CHD1O14646 DUSP8P3-201ENST00000399571 1760 ntBASIC35.33■■■■□ 3.25
CHD1O14646 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CHD1O14646 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC35.33■■■■□ 3.25
CHD1O14646 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CHD1O14646 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CHD1O14646 Z99916.2-201ENST00000604037 246 ntBASIC35.33■■■■□ 3.25
CHD1O14646 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC35.32■■■■□ 3.25
CHD1O14646 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.25
CHD1O14646 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC35.32■■■■□ 3.25
CHD1O14646 AC135731.1-201ENST00000569415 2548 ntBASIC35.32■■■■□ 3.24
CHD1O14646 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC35.32■■■■□ 3.24
CHD1O14646 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CHD1O14646 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC35.32■■■■□ 3.24
CHD1O14646 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC35.32■■■■□ 3.24
CHD1O14646 AC233263.1-201ENST00000578059 224 ntBASIC35.32■■■■□ 3.24
CHD1O14646 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC35.32■■■■□ 3.24
CHD1O14646 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC35.31■■■■□ 3.24
CHD1O14646 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CHD1O14646 AL162412.1-201ENST00000567129 965 ntBASIC35.31■■■■□ 3.24
CHD1O14646 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC35.31■■■■□ 3.24
CHD1O14646 AL445228.2-201ENST00000605589 952 ntBASIC35.31■■■■□ 3.24
CHD1O14646 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
CHD1O14646 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CHD1O14646 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC35.31■■■■□ 3.24
CHD1O14646 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC35.3■■■■□ 3.24
CHD1O14646 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC35.3■■■■□ 3.24
CHD1O14646 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CHD1O14646 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC35.3■■■■□ 3.24
CHD1O14646 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CHD1O14646 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CHD1O14646 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC35.29■■■■□ 3.24
CHD1O14646 FGF8-207ENST00000618991 856 ntTSL 3 BASIC35.29■■■■□ 3.24
CHD1O14646 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CHD1O14646 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CHD1O14646 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC35.29■■■■□ 3.24
CHD1O14646 RCN1P1-201ENST00000400413 996 ntBASIC35.29■■■■□ 3.24
CHD1O14646 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CHD1O14646 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
CHD1O14646 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC35.29■■■■□ 3.24
CHD1O14646 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CHD1O14646 LINC00543-201ENST00000567234 1845 ntBASIC35.28■■■■□ 3.24
CHD1O14646 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC35.28■■■■□ 3.24
CHD1O14646 AC012618.2-201ENST00000428058 849 ntBASIC35.28■■■■□ 3.24
CHD1O14646 PPOX-219ENST00000544598 813 ntTSL 2 BASIC35.28■■■■□ 3.24
CHD1O14646 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC35.28■■■■□ 3.24
CHD1O14646 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC35.28■■■■□ 3.24
CHD1O14646 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
CHD1O14646 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC35.27■■■■□ 3.24
CHD1O14646 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC35.27■■■■□ 3.24
CHD1O14646 CYP2T3P-201ENST00000601990 817 ntBASIC35.27■■■■□ 3.24
CHD1O14646 AC069544.1-201ENST00000609399 999 ntBASIC35.27■■■■□ 3.24
CHD1O14646 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC35.27■■■■□ 3.24
CHD1O14646 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CHD1O14646 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CHD1O14646 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC35.26■■■■□ 3.24
CHD1O14646 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC35.26■■■■□ 3.24
CHD1O14646 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC35.26■■■■□ 3.24
CHD1O14646 REXO1L12P-201ENST00000622156 912 ntBASIC35.26■■■■□ 3.24
CHD1O14646 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CHD1O14646 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CHD1O14646 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CHD1O14646 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CHD1O14646 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC35.26■■■■□ 3.23
CHD1O14646 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CHD1O14646 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC35.25■■■■□ 3.23
CHD1O14646 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
CHD1O14646 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CHD1O14646 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CHD1O14646 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CHD1O14646 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC35.24■■■■□ 3.23
CHD1O14646 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC35.24■■■■□ 3.23
CHD1O14646 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC35.24■■■■□ 3.23
CHD1O14646 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC35.24■■■■□ 3.23
CHD1O14646 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CHD1O14646 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CHD1O14646 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC35.24■■■■□ 3.23
CHD1O14646 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC35.23■■■■□ 3.23
CHD1O14646 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms