Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLDN4O14493 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN4O14493 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN4O14493 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN4O14493 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN4O14493 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN4O14493 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN4O14493 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN4O14493 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN4O14493 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN4O14493 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN4O14493 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CLDN4O14493 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN4O14493 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN4O14493 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN4O14493 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLDN4O14493 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLDN4O14493 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN4O14493 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.14■□□□□ 0.81
CLDN4O14493 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN4O14493 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.14■□□□□ 0.81
CLDN4O14493 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLDN4O14493 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLDN4O14493 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN4O14493 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN4O14493 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.13■□□□□ 0.81
CLDN4O14493 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CLDN4O14493 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN4O14493 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN4O14493 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN4O14493 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN4O14493 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN4O14493 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN4O14493 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN4O14493 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CLDN4O14493 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN4O14493 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN4O14493 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLDN4O14493 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLDN4O14493 AP006587.3-201ENST00000525742 1516 ntBASIC20.12■□□□□ 0.81
CLDN4O14493 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLDN4O14493 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 AC026271.2-201ENST00000428091 497 ntBASIC20.12■□□□□ 0.81
CLDN4O14493 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN4O14493 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CLDN4O14493 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN4O14493 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN4O14493 CCDC92B-201ENST00000575506 885 ntBASIC20.12■□□□□ 0.81
CLDN4O14493 TERF1P2-201ENST00000583350 1212 ntBASIC20.12■□□□□ 0.81
CLDN4O14493 MIR5787-201ENST00000611784 55 ntBASIC20.12■□□□□ 0.81
CLDN4O14493 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN4O14493 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN4O14493 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN4O14493 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLDN4O14493 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN4O14493 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN4O14493 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms