Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTCAO00442 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.44■□□□□ 0.86
RTCAO00442 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTCAO00442 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.43■□□□□ 0.86
RTCAO00442 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.43■□□□□ 0.86
RTCAO00442 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTCAO00442 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RTCAO00442 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.43■□□□□ 0.86
RTCAO00442 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.43■□□□□ 0.86
RTCAO00442 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTCAO00442 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RTCAO00442 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTCAO00442 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTCAO00442 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
RTCAO00442 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTCAO00442 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTCAO00442 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.42■□□□□ 0.86
RTCAO00442 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTCAO00442 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.42■□□□□ 0.86
RTCAO00442 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.42■□□□□ 0.86
RTCAO00442 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTCAO00442 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.42■□□□□ 0.86
RTCAO00442 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTCAO00442 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.42■□□□□ 0.86
RTCAO00442 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTCAO00442 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RTCAO00442 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
RTCAO00442 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.41■□□□□ 0.86
RTCAO00442 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.41■□□□□ 0.86
RTCAO00442 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.41■□□□□ 0.86
RTCAO00442 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTCAO00442 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.4■□□□□ 0.86
RTCAO00442 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTCAO00442 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.4■□□□□ 0.86
RTCAO00442 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.4■□□□□ 0.86
RTCAO00442 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.4■□□□□ 0.86
RTCAO00442 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTCAO00442 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.86
RTCAO00442 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTCAO00442 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.39■□□□□ 0.85
RTCAO00442 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RTCAO00442 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.39■□□□□ 0.85
RTCAO00442 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTCAO00442 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.38■□□□□ 0.85
RTCAO00442 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.38■□□□□ 0.85
RTCAO00442 AL034346.1-201ENST00000568244 1277 ntBASIC20.38■□□□□ 0.85
RTCAO00442 MIR6084-201ENST00000622012 110 ntBASIC20.38■□□□□ 0.85
RTCAO00442 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RTCAO00442 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTCAO00442 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.37■□□□□ 0.85
RTCAO00442 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.37■□□□□ 0.85
RTCAO00442 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RTCAO00442 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.37■□□□□ 0.85
RTCAO00442 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.37■□□□□ 0.85
RTCAO00442 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.37■□□□□ 0.85
RTCAO00442 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.37■□□□□ 0.85
RTCAO00442 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTCAO00442 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTCAO00442 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.36■□□□□ 0.85
RTCAO00442 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.36■□□□□ 0.85
RTCAO00442 IRS3P-201ENST00000223076 1006 ntBASIC20.36■□□□□ 0.85
RTCAO00442 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.36■□□□□ 0.85
RTCAO00442 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms