Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.3■■□□□ 1
H3BM21 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.3■■□□□ 1
H3BM21 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.3■■□□□ 1
H3BM21 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.3■■□□□ 1
H3BM21 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.3■■□□□ 1
H3BM21 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H3BM21 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.3■■□□□ 1
H3BM21 BID-214ENST00000617586 542 ntTSL 5 BASIC21.3■■□□□ 1
H3BM21 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H3BM21 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H3BM21 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.3■■□□□ 1
H3BM21 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
H3BM21 AC137767.1-201ENST00000602918 1920 ntBASIC21.29■■□□□ 1
H3BM21 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
H3BM21 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H3BM21 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.29■■□□□ 1
H3BM21 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.29■■□□□ 1
H3BM21 KRT18P11-201ENST00000435214 1283 ntBASIC21.29■■□□□ 1
H3BM21 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.29■■□□□ 1
H3BM21 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.29■■□□□ 1
H3BM21 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.29■■□□□ 1
H3BM21 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H3BM21 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.29■■□□□ 1
H3BM21 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.29■■□□□ 1
H3BM21 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.28■■□□□ 1
H3BM21 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.28■■□□□ 1
H3BM21 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
H3BM21 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.28■■□□□ 1
H3BM21 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
H3BM21 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.27■■□□□ 1
H3BM21 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
H3BM21 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
H3BM21 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
H3BM21 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 AC079089.2-201ENST00000531211 1277 ntBASIC21.27■■□□□ 1
H3BM21 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
H3BM21 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H3BM21 AC005224.4-201ENST00000583262 1652 ntBASIC21.27■■□□□ 1
H3BM21 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.27■■□□□ 1
H3BM21 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
H3BM21 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
H3BM21 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
H3BM21 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.26■□□□□ 0.99
H3BM21 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.26■□□□□ 0.99
H3BM21 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.26■□□□□ 0.99
H3BM21 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.26■□□□□ 0.99
H3BM21 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.26■□□□□ 0.99
H3BM21 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.26■□□□□ 0.99
H3BM21 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
H3BM21 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H3BM21 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3BM21 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3BM21 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.25■□□□□ 0.99
H3BM21 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
H3BM21 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.25■□□□□ 0.99
H3BM21 AC073111.5-205ENST00000641717 521 ntBASIC21.25■□□□□ 0.99
H3BM21 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3BM21 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3BM21 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.25■□□□□ 0.99
H3BM21 GUSBP5-202ENST00000510805 1989 ntBASIC21.25■□□□□ 0.99
H3BM21 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.24■□□□□ 0.99
H3BM21 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
H3BM21 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.24■□□□□ 0.99
H3BM21 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.24■□□□□ 0.99
H3BM21 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
H3BM21 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H3BM21 AC139530.1-201ENST00000575312 1977 ntBASIC21.24■□□□□ 0.99
H3BM21 AC080038.3-201ENST00000623346 1952 ntBASIC21.24■□□□□ 0.99
H3BM21 KRT87P-202ENST00000534226 1464 ntBASIC21.24■□□□□ 0.99
H3BM21 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.24■□□□□ 0.99
H3BM21 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms