Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 AC079140.4-201ENST00000507448 529 ntBASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 AC087742.1-201ENST00000575880 1738 ntBASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPA2E9PIF3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 KRT19P1-201ENST00000405746 1186 ntBASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 AC006015.1-201ENST00000429970 570 ntBASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA2E9PIF3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 AC080038.1-201ENST00000611274 1154 ntBASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA2E9PIF3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA2E9PIF3 AC127496.7-201ENST00000625110 1798 ntBASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NPIPA2E9PIF3 AC009237.3-201ENST00000393279 1427 ntBASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 AC005224.4-201ENST00000583262 1652 ntBASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA2E9PIF3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms