Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUPT3HB4E1H0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUPT3HB4E1H0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.04■□□□□ 0.96
SUPT3HB4E1H0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 AC131212.1-201ENST00000613771 668 ntBASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUPT3HB4E1H0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.02■□□□□ 0.96
SUPT3HB4E1H0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.02■□□□□ 0.95
SUPT3HB4E1H0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 AP005435.1-201ENST00000529293 1178 ntBASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 Z98882.1-201ENST00000622160 2253 ntBASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
SUPT3HB4E1H0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUPT3HB4E1H0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21■□□□□ 0.95
SUPT3HB4E1H0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21■□□□□ 0.95
SUPT3HB4E1H0 AC104564.3-201ENST00000582367 638 ntBASIC21■□□□□ 0.95
SUPT3HB4E1H0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21■□□□□ 0.95
SUPT3HB4E1H0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21■□□□□ 0.95
SUPT3HB4E1H0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUPT3HB4E1H0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SUPT3HB4E1H0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SUPT3HB4E1H0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUPT3HB4E1H0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUPT3HB4E1H0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 MIR4767-201ENST00000582827 78 ntBASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUPT3HB4E1H0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms