Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 LINC01960-201ENST00000563759 1884 ntBASIC19.79■□□□□ 0.76
SH3D21A4FU49 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3D21A4FU49 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3D21A4FU49 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3D21A4FU49 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3D21A4FU49 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3D21A4FU49 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3D21A4FU49 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 AC092666.2-201ENST00000613287 246 ntBASIC19.78■□□□□ 0.76
SH3D21A4FU49 AC009086.3-201ENST00000623486 1008 ntBASIC19.78■□□□□ 0.76
SH3D21A4FU49 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3D21A4FU49 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3D21A4FU49 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3D21A4FU49 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3D21A4FU49 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3D21A4FU49 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 LINC01529-204ENST00000636474 1715 ntBASIC19.76■□□□□ 0.75
SH3D21A4FU49 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 AC136469.2-201ENST00000623944 1028 ntBASIC19.76■□□□□ 0.75
SH3D21A4FU49 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3D21A4FU49 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3D21A4FU49 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 FP325331.1-202ENST00000623531 1380 ntBASIC19.75■□□□□ 0.75
SH3D21A4FU49 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 AC099791.1-201ENST00000416440 715 ntBASIC19.75■□□□□ 0.75
SH3D21A4FU49 AC006455.2-201ENST00000429931 906 ntBASIC19.75■□□□□ 0.75
SH3D21A4FU49 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3D21A4FU49 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 AC073130.3-201ENST00000624389 2278 ntBASIC19.75■□□□□ 0.75
SH3D21A4FU49 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3D21A4FU49 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms