Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.16■□□□□ 0.34
TCRBV4S1A1TA0A5B7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV4S1A1TA0A5B7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TCRBV4S1A1TA0A5B7 AC004687.1-201ENST00000579003 1625 ntBASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC027612.3-201ENST00000413684 1047 ntBASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC123595.1-201ENST00000440769 1046 ntBASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 AC105233.4-201ENST00000642045 216 ntBASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV4S1A1TA0A5B7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV4S1A1TA0A5B7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms