Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 SERBP1P1-201ENST00000396021 1160 ntBASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV10-1A0A0K0K1A3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV10-1A0A0K0K1A3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.08■□□□□ 0.01
TRBV10-1A0A0K0K1A3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV10-1A0A0K0K1A3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 AC010525.1-201ENST00000585559 441 ntBASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRBV10-1A0A0K0K1A3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRBV10-1A0A0K0K1A3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.06■□□□□ 0
TRBV10-1A0A0K0K1A3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.05■□□□□ 0
TRBV10-1A0A0K0K1A3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV10-1A0A0K0K1A3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV10-1A0A0K0K1A3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms