Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AC079630.1-202ENST00000618127 1840 ntBASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV20A0A0B4J274 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 AC004687.1-201ENST00000579003 1625 ntBASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 AC090192.1-201ENST00000517740 490 ntBASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV20A0A0B4J274 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 AL137060.1-201ENST00000618151 2648 ntBASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV20A0A0B4J274 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV20A0A0B4J274 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRAV20A0A0B4J274 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 AC010141.3-201ENST00000456659 717 ntBASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms