Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 FEM1AP4-201ENST00000443167 1987 ntBASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV34A0A0B4J273 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 RARRES2P2-201ENST00000394842 485 ntBASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 FP325331.1-202ENST00000623531 1380 ntBASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV34A0A0B4J273 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 AC007952.6-201ENST00000573168 2673 ntBASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 AC003957.1-201ENST00000625108 2673 ntBASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 AC009086.3-201ENST00000623486 1008 ntBASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV34A0A0B4J273 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV34A0A0B4J273 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV34A0A0B4J273 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV34A0A0B4J273 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV34A0A0B4J273 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV34A0A0B4J273 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 AC004687.1-201ENST00000579003 1625 ntBASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SNX5-217ENST00000606557 1087 ntBASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV34A0A0B4J273 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV34A0A0B4J273 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms