Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-4A0A0B4J246 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-4A0A0B4J246 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 GUSBP5-201ENST00000418136 578 ntBASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-4A0A0B4J246 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 AC092171.4-201ENST00000609130 632 ntBASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-4A0A0B4J246 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-4A0A0B4J246 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-4A0A0B4J246 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms