Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 AC018755.3-202ENST00000596210 929 ntBASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-1A0A0B4J245 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 AC004448.1-201ENST00000458332 883 ntBASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 AP005212.1-201ENST00000581547 1997 ntBASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV12-1A0A0B4J245 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 AC022413.1-201ENST00000624602 984 ntBASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-1A0A0B4J245 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV12-1A0A0B4J245 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 AL049796.1-201ENST00000565336 1766 ntBASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 C17orf82-201ENST00000623772 1530 ntBASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-1A0A0B4J245 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms