Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SUDS3P1-201ENST00000505831 966 ntBASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 RASA4CP-201ENST00000424092 1398 ntBASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.94■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC091305.1-201ENST00000479476 895 ntBASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC003102.1-202ENST00000563394 1796 ntBASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AL034346.1-201ENST00000568244 1277 ntBASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 Z98882.1-201ENST00000622160 2253 ntBASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 AP006587.3-201ENST00000525742 1516 ntBASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.9■□□□□ 0.62
IGKV1D-43A0A0B4J1Z2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms