Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 C17orf82-201ENST00000623772 1530 ntBASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-1A0A0A6YYK1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-1A0A0A6YYK1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-1A0A0A6YYK1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-1A0A0A6YYK1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-1A0A0A6YYK1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-1A0A0A6YYK1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 AC092028.1-203ENST00000608262 953 ntBASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 LINC01521-201ENST00000504184 1943 ntBASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-1A0A0A6YYK1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-1A0A0A6YYK1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms