Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 ZNRF2P2-203ENST00000454624 420 ntBASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV6A0A075B6T7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 AL020996.1-203ENST00000536896 2307 ntBASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV6A0A075B6T7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 AL158211.5-201ENST00000623583 2518 ntBASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV6A0A075B6T7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 MIR3648-2-201ENST00000581792 180 ntBASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 MIR3648-1-201ENST00000615959 180 ntBASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
TRAV6A0A075B6T7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAV6A0A075B6T7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV6A0A075B6T7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 AC138932.1-201ENST00000534164 6830 ntBASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV6A0A075B6T7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms