Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL512380.1-201ENST00000637411 2106 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 CDIPT-AS1-203ENST00000638164 713 ntBASIC12.33□□□□□ -0.44
SLC1A1P43005 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 HPCAL4-203ENST00000617690 4758 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC1A1P43005 RHOXF2-201ENST00000371388 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 TCTE1-202ENST00000371505 3067 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 TTN-AS1-204ENST00000431259 1472 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 MAGEB1-203ENST00000397550 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 GTF2H2-202ENST00000330280 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC1A1P43005 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC1A1P43005 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 FIRRE-201ENST00000427391 2926 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC1A1P43005 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 CPT1B-207ENST00000457250 2217 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC1A1P43005 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SLC1A1P43005 ART2P-201ENST00000415521 822 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC12.32□□□□□ -0.44
SLC1A1P43005 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC1A1P43005 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC1A1P43005 C10orf113-202ENST00000534331 579 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC12.32□□□□□ -0.44
SLC1A1P43005 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC12.32□□□□□ -0.44
SLC1A1P43005 AC098965.1-201ENST00000564217 967 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 AP000902.1-201ENST00000578806 368 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 MIR4517-201ENST00000578855 79 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC1A1P43005 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.32□□□□□ -0.44
SLC1A1P43005 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC1A1P43005 RN7SK-201ENST00000636484 328 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 KLHL10-201ENST00000293303 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 NID2-201ENST00000216286 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 TRIM62-201ENST00000291416 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 MARCH8-202ENST00000395769 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC1A1P43005 AC092447.8-201ENST00000566570 4162 ntBASIC12.32□□□□□ -0.44
SLC1A1P43005 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC1A1P43005 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC1A1P43005 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC011479.3-201ENST00000594299 1890 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 CHTF8-201ENST00000306585 2561 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 LINC01480-204ENST00000597199 1718 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 ACTG2-202ENST00000409624 2064 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 POLR3C-202ENST00000369294 1590 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 LINC01016-201ENST00000506222 3151 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 ITGAM-201ENST00000287497 3595 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 SH2D4B-201ENST00000313455 2889 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 PROKR2-201ENST00000217270 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 CMTM2-201ENST00000268595 1054 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC004884.1-201ENST00000393647 319 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SLC1A1P43005 HNRNPA1P59-201ENST00000430583 918 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 OR7E23P-201ENST00000435600 1048 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC1A1P43005 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms