Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HTR5A-AS1-201ENST00000395731 2703 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 MFSD4A-201ENST00000367147 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 AC007638.1-201ENST00000576751 1763 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 TSPAN16-201ENST00000316737 1040 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SLC1A1P43005 MED20-204ENST00000409312 932 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 BANF1P4-201ENST00000420029 270 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 AC007881.1-201ENST00000437460 187 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 OR7E33P-201ENST00000437705 966 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 AL109936.1-201ENST00000442089 460 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 DDX39AP1-201ENST00000445147 1181 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC12.38□□□□□ -0.43
SLC1A1P43005 RN7SL704P-201ENST00000478699 274 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 RN7SL265P-201ENST00000486808 300 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 PDPN-208ENST00000509009 571 ntTSL 4 BASIC12.38□□□□□ -0.43
SLC1A1P43005 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 HMGB1P8-201ENST00000558211 949 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 TEX26-AS1-206ENST00000586464 851 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC12.38□□□□□ -0.43
SLC1A1P43005 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 AP000350.6-201ENST00000609510 5637 ntBASIC12.38□□□□□ -0.43
SLC1A1P43005 MIR99AHG-220ENST00000635845 1588 ntTSL 5 BASIC12.38□□□□□ -0.43
SLC1A1P43005 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SLC1A1P43005 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SLC1A1P43005 POMGNT1-202ENST00000371992 2934 ntTSL 2 BASIC12.38□□□□□ -0.43
SLC1A1P43005 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 NPSR1-201ENST00000359791 1410 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 CWH43-204ENST00000513409 2390 ntTSL 2 BASIC12.37□□□□□ -0.43
SLC1A1P43005 AC142384.1-201ENST00000566346 1549 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 THRAP3P1-201ENST00000411753 2786 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 AC002519.1-201ENST00000570073 2792 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 COPS7A-203ENST00000534877 1707 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 SERPINB8P1-201ENST00000401898 377 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 MTND6P7-201ENST00000433237 524 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 C2orf27AP2-201ENST00000438438 555 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 AL627082.1-201ENST00000443847 235 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC12.37□□□□□ -0.43
SLC1A1P43005 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 PSCA-204ENST00000513264 551 ntAPPRIS ALT2 TSL 4 BASIC12.37□□□□□ -0.43
SLC1A1P43005 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC12.37□□□□□ -0.43
SLC1A1P43005 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC12.37□□□□□ -0.43
SLC1A1P43005 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 EIF3J-AS1-204ENST00000560049 639 ntTSL 2 BASIC12.37□□□□□ -0.43
SLC1A1P43005 MIR4761-201ENST00000585066 82 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 TTTY5-201ENST00000400581 1562 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 C1orf131-201ENST00000318906 2483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 ZNF19-205ENST00000564230 2205 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SLC1A1P43005 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SLC1A1P43005 MOCS1P1-201ENST00000564020 1612 ntBASIC12.37□□□□□ -0.43
SLC1A1P43005 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC12.37□□□□□ -0.43
SLC1A1P43005 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.37□□□□□ -0.43
SLC1A1P43005 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 F7-206ENST00000541084 2873 ntTSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 C3orf14-206ENST00000494481 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 AC020629.1-201ENST00000550858 1650 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 ZNF16-201ENST00000276816 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 DLEC1-202ENST00000346219 5490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms