Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB3Q9Y5G1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 AC091305.1-201ENST00000479476 895 ntBASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB3Q9Y5G1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 AC010542.4-201ENST00000563151 1910 ntBASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 OR2I1P-207ENST00000453522 948 ntBASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGB3Q9Y5G1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 MIR4767-201ENST00000582827 78 ntBASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 AC087239.1-201ENST00000622671 572 ntBASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 AL031602.1-201ENST00000633169 911 ntBASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB3Q9Y5G1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB3Q9Y5G1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 AP001330.3-201ENST00000520123 633 ntBASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 AC136469.2-201ENST00000623944 1028 ntBASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB3Q9Y5G1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 RASA4CP-201ENST00000424092 1398 ntBASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 AF213884.3-201ENST00000563833 479 ntBASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGB3Q9Y5G1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms