Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 DUSP8P5-201ENST00000422884 1815 ntBASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.56
CTDP1Q9Y5B0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CTDP1Q9Y5B0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 AC055733.4-201ENST00000638462 1354 ntBASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTDP1Q9Y5B0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 AP001160.3-201ENST00000601484 763 ntBASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 RAP2CP1-201ENST00000605103 478 ntBASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.8■■□□□ 1.56
CTDP1Q9Y5B0 AC093323.1-202ENST00000635031 2045 ntBASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 LINC00526-201ENST00000581067 1875 ntBASIC24.79■■□□□ 1.56
CTDP1Q9Y5B0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTDP1Q9Y5B0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTDP1Q9Y5B0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 UBE2DNL-204ENST00000602536 740 ntBASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTDP1Q9Y5B0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 MFSD11-216ENST00000590393 1141 ntBASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.75■■□□□ 1.55
CTDP1Q9Y5B0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms