Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 MIR939-201ENST00000401314 82 ntBASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 AF213884.3-201ENST00000563833 479 ntBASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 SLC25A24-204ENST00000569674 2357 ntBASIC17.13■□□□□ 0.33
LSM4Q9Y4Z0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM4Q9Y4Z0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM4Q9Y4Z0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 AP001330.3-201ENST00000520123 633 ntBASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 AC092171.4-201ENST00000609130 632 ntBASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM4Q9Y4Z0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 SYT6-210ENST00000641643 1587 ntBASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 AC004687.1-201ENST00000579003 1625 ntBASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM4Q9Y4Z0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 Z98882.1-201ENST00000622160 2253 ntBASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM4Q9Y4Z0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 AC091305.1-201ENST00000479476 895 ntBASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 MIR6821-201ENST00000617625 74 ntBASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.08■□□□□ 0.32
LSM4Q9Y4Z0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms