Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 AC092437.1-201ENST00000624794 1048 ntBASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KDM3AQ9Y4C1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.23■■□□□ 1.47
KDM3AQ9Y4C1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 EP400NL-214ENST00000641289 2402 ntBASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KDM3AQ9Y4C1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 AL137784.2-201ENST00000607332 1000 ntBASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KDM3AQ9Y4C1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
KDM3AQ9Y4C1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.2■■□□□ 1.47
KDM3AQ9Y4C1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
KDM3AQ9Y4C1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 NTF6G-201ENST00000591094 616 ntBASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 RARRES2P11-201ENST00000635158 484 ntBASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KDM3AQ9Y4C1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 AL034346.1-201ENST00000568244 1277 ntBASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KDM3AQ9Y4C1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 SMUG1P1-201ENST00000590640 811 ntBASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 TPRG1LP1-201ENST00000598702 760 ntBASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3AQ9Y4C1 C11orf96-202ENST00000528572 1834 ntBASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3AQ9Y4C1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms