Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP2BQ9UQN3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 MIR3181-201ENST00000578512 73 ntBASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP2BQ9UQN3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 GUSBP5-201ENST00000418136 578 ntBASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 MIR3621-201ENST00000580529 85 ntBASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP2BQ9UQN3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP2BQ9UQN3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHMP2BQ9UQN3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
CHMP2BQ9UQN3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.77■■□□□ 1.07
CHMP2BQ9UQN3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHMP2BQ9UQN3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 OR2I1P-207ENST00000453522 948 ntBASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP2BQ9UQN3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 AC010525.1-201ENST00000585559 441 ntBASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP2BQ9UQN3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
CHMP2BQ9UQN3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms