Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ECEL1P1-201ENST00000373592 1742 ntBASIC23.1■■□□□ 1.29
SIX4Q9UIU6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 AL162430.1-201ENST00000480705 870 ntBASIC23.09■■□□□ 1.29
SIX4Q9UIU6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX4Q9UIU6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIX4Q9UIU6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SIX4Q9UIU6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SIX4Q9UIU6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SIX4Q9UIU6 AP006587.3-201ENST00000525742 1516 ntBASIC23.08■■□□□ 1.28
SIX4Q9UIU6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 AL117328.2-201ENST00000624617 1940 ntBASIC23.07■■□□□ 1.28
SIX4Q9UIU6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX4Q9UIU6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 AC026471.6-201ENST00000622954 1905 ntBASIC23.06■■□□□ 1.28
SIX4Q9UIU6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX4Q9UIU6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 KRT18P5-201ENST00000436075 1291 ntBASIC23.05■■□□□ 1.28
SIX4Q9UIU6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SIX4Q9UIU6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SIX4Q9UIU6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 FAM99A-202ENST00000538190 1989 ntBASIC23.03■■□□□ 1.28
SIX4Q9UIU6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SIX4Q9UIU6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX4Q9UIU6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX4Q9UIU6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SIX4Q9UIU6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms