Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCDNQ9UBB6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.38■■□□□ 1.01
NCDNQ9UBB6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 FAM210CP-201ENST00000445714 574 ntBASIC21.37■■□□□ 1.01
NCDNQ9UBB6 AC010141.2-201ENST00000452426 721 ntBASIC21.37■■□□□ 1.01
NCDNQ9UBB6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 AC016405.3-201ENST00000607710 860 ntBASIC21.37■■□□□ 1.01
NCDNQ9UBB6 AC010331.1-201ENST00000611423 582 ntBASIC21.37■■□□□ 1.01
NCDNQ9UBB6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
NCDNQ9UBB6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 AC093787.1-201ENST00000450396 207 ntBASIC21.36■■□□□ 1.01
NCDNQ9UBB6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 AC073912.3-201ENST00000624414 853 ntBASIC21.36■■□□□ 1.01
NCDNQ9UBB6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.36■■□□□ 1.01
NCDNQ9UBB6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 MIR718-201ENST00000390190 70 ntBASIC21.35■■□□□ 1.01
NCDNQ9UBB6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 UBE2SP1-201ENST00000450587 669 ntBASIC21.35■■□□□ 1.01
NCDNQ9UBB6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCDNQ9UBB6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 AL512625.2-201ENST00000417533 625 ntBASIC21.34■■□□□ 1.01
NCDNQ9UBB6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCDNQ9UBB6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 AL139125.2-201ENST00000623134 1869 ntBASIC21.33■■□□□ 1.01
NCDNQ9UBB6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 MYC-209ENST00000641252 345 ntBASIC21.33■■□□□ 1.01
NCDNQ9UBB6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
NCDNQ9UBB6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
NCDNQ9UBB6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.33■■□□□ 1
NCDNQ9UBB6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 AC026366.1-201ENST00000488803 879 ntBASIC21.32■■□□□ 1
NCDNQ9UBB6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.32■■□□□ 1
NCDNQ9UBB6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.32■■□□□ 1
NCDNQ9UBB6 AC138907.5-202ENST00000569484 235 ntBASIC21.32■■□□□ 1
NCDNQ9UBB6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.32■■□□□ 1
NCDNQ9UBB6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms