Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.81■□□□□ 0.92
LRIT1Q9P2V4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 AL034346.1-201ENST00000568244 1277 ntBASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 MFSD11-216ENST00000590393 1141 ntBASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT1Q9P2V4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 UBE2DNL-204ENST00000602536 740 ntBASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT1Q9P2V4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT1Q9P2V4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 MIR663A-201ENST00000385250 93 ntBASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 AC104771.1-201ENST00000603335 964 ntBASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT1Q9P2V4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRIT1Q9P2V4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
LRIT1Q9P2V4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 NCF1B-203ENST00000435988 1254 ntBASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 AL109923.1-201ENST00000618799 583 ntBASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
LRIT1Q9P2V4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT1Q9P2V4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms