Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX18Q9NVP1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 pRNA.6-201ENST00000610482 90 ntBASIC20.62■□□□□ 0.89
DDX18Q9NVP1 pRNA.5-201ENST00000612139 90 ntBASIC20.62■□□□□ 0.89
DDX18Q9NVP1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 pRNA.11-201ENST00000618423 90 ntBASIC20.62■□□□□ 0.89
DDX18Q9NVP1 pRNA.13-201ENST00000619112 90 ntBASIC20.62■□□□□ 0.89
DDX18Q9NVP1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.62■□□□□ 0.89
DDX18Q9NVP1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX18Q9NVP1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
DDX18Q9NVP1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 AC131281.2-201ENST00000520478 145 ntBASIC20.61■□□□□ 0.89
DDX18Q9NVP1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX18Q9NVP1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 LINC01960-201ENST00000563759 1884 ntBASIC20.6■□□□□ 0.89
DDX18Q9NVP1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 MIR4466-201ENST00000606121 54 ntBASIC20.6■□□□□ 0.89
DDX18Q9NVP1 AC131212.1-201ENST00000613771 668 ntBASIC20.6■□□□□ 0.89
DDX18Q9NVP1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDX18Q9NVP1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.59■□□□□ 0.89
DDX18Q9NVP1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX18Q9NVP1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 AC133637.1-201ENST00000624115 1537 ntBASIC20.58■□□□□ 0.89
DDX18Q9NVP1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
DDX18Q9NVP1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
DDX18Q9NVP1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX18Q9NVP1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX18Q9NVP1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX18Q9NVP1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX18Q9NVP1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms