Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 AC027612.3-201ENST00000413684 1047 ntBASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ECHDC1Q9NTX5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 AC026471.6-201ENST00000622954 1905 ntBASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ECHDC1Q9NTX5 AC009237.3-201ENST00000393279 1427 ntBASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 TPRG1LP1-201ENST00000598702 760 ntBASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ECHDC1Q9NTX5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.21■■□□□ 1.79
ECHDC1Q9NTX5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ECHDC1Q9NTX5 AP006587.3-201ENST00000525742 1516 ntBASIC26.2■■□□□ 1.79
ECHDC1Q9NTX5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ECHDC1Q9NTX5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 AC005224.4-201ENST00000583262 1652 ntBASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ECHDC1Q9NTX5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ECHDC1Q9NTX5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 AC055733.4-201ENST00000638462 1354 ntBASIC26.18■■□□□ 1.78
ECHDC1Q9NTX5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.17■■□□□ 1.78
ECHDC1Q9NTX5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms