Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 HCG11-201ENST00000411553 5696 ntBASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCX3AQ9NNX9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 DUX4L11-201ENST00000611504 1267 ntBASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 DUX4L12-201ENST00000614593 1267 ntBASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 DUX4L14-201ENST00000621227 1267 ntBASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VCX3AQ9NNX9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCX3AQ9NNX9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCX3AQ9NNX9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.02■□□□□ 0.79
VCX3AQ9NNX9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.02■□□□□ 0.79
VCX3AQ9NNX9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 LETM1P2-201ENST00000597330 2178 ntBASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.01■□□□□ 0.79
VCX3AQ9NNX9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3AQ9NNX9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCX3AQ9NNX9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3AQ9NNX9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3AQ9NNX9 AIRN-201ENST00000601203 4374 ntBASIC20■□□□□ 0.79
VCX3AQ9NNX9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20■□□□□ 0.79
VCX3AQ9NNX9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VCX3AQ9NNX9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20■□□□□ 0.79
VCX3AQ9NNX9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCX3AQ9NNX9 AL353803.4-201ENST00000565882 1934 ntBASIC20■□□□□ 0.79
VCX3AQ9NNX9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20■□□□□ 0.79
VCX3AQ9NNX9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCX3AQ9NNX9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 RP9P-202ENST00000450133 1212 ntBASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCX3AQ9NNX9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCX3AQ9NNX9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 AL162393.1-201ENST00000437852 946 ntBASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms