Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HES4Q9HCC6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HES4Q9HCC6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 IGHV3-19-201ENST00000521488 291 ntBASIC18.15■□□□□ 0.5
HES4Q9HCC6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.15■□□□□ 0.5
HES4Q9HCC6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HES4Q9HCC6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.15■□□□□ 0.5
HES4Q9HCC6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.14■□□□□ 0.49
HES4Q9HCC6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 AP001330.3-201ENST00000520123 633 ntBASIC18.14■□□□□ 0.49
HES4Q9HCC6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.14■□□□□ 0.49
HES4Q9HCC6 AC126544.1-201ENST00000580842 1059 ntBASIC18.14■□□□□ 0.49
HES4Q9HCC6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.14■□□□□ 0.49
HES4Q9HCC6 AL355001.2-201ENST00000620617 1191 ntBASIC18.14■□□□□ 0.49
HES4Q9HCC6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HES4Q9HCC6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
HES4Q9HCC6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 AC099791.1-201ENST00000416440 715 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.13■□□□□ 0.49
HES4Q9HCC6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.13■□□□□ 0.49
HES4Q9HCC6 AL034346.1-201ENST00000568244 1277 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 AC008764.7-201ENST00000593779 1081 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 AL031432.3-201ENST00000607698 485 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.13■□□□□ 0.49
HES4Q9HCC6 AC010542.4-201ENST00000563151 1910 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.13■□□□□ 0.49
HES4Q9HCC6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HES4Q9HCC6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HES4Q9HCC6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.12■□□□□ 0.49
HES4Q9HCC6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
HES4Q9HCC6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HES4Q9HCC6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.11■□□□□ 0.49
HES4Q9HCC6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.11■□□□□ 0.49
HES4Q9HCC6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HES4Q9HCC6 MIR939-201ENST00000401314 82 ntBASIC18.11■□□□□ 0.49
HES4Q9HCC6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.11■□□□□ 0.49
HES4Q9HCC6 AL139246.5-201ENST00000606645 996 ntBASIC18.11■□□□□ 0.49
HES4Q9HCC6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.11■□□□□ 0.49
HES4Q9HCC6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HES4Q9HCC6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
HES4Q9HCC6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HES4Q9HCC6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HES4Q9HCC6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HES4Q9HCC6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HES4Q9HCC6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.1■□□□□ 0.49
HES4Q9HCC6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HES4Q9HCC6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms