Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZCCHC4Q9H5U6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 AL157384.1-201ENST00000445995 2473 ntBASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 AF106564.1-201ENST00000607058 2553 ntBASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC4Q9H5U6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 RARRES2P1-201ENST00000474487 481 ntBASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 AL499627.2-201ENST00000606283 725 ntBASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ZCCHC4Q9H5U6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC4Q9H5U6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC4Q9H5U6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZCCHC4Q9H5U6 AL391422.3-201ENST00000603791 2761 ntBASIC18.8■□□□□ 0.6
ZCCHC4Q9H5U6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZCCHC4Q9H5U6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 AC009299.2-201ENST00000482477 511 ntBASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZCCHC4Q9H5U6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZCCHC4Q9H5U6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms