Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
AMBRA1Q9C0C7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
AMBRA1Q9C0C7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AMBRA1Q9C0C7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AMBRA1Q9C0C7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AMBRA1Q9C0C7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 LINC01521-201ENST00000504184 1943 ntBASIC20■□□□□ 0.79
AMBRA1Q9C0C7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 AC131281.2-201ENST00000520478 145 ntBASIC20■□□□□ 0.79
AMBRA1Q9C0C7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
AMBRA1Q9C0C7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 AL512631.2-201ENST00000604634 923 ntBASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AMBRA1Q9C0C7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms