Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 ELOCP23-201ENST00000452014 332 ntBASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 NTAN1P1-201ENST00000603150 646 ntBASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AL450336.1-201ENST00000605180 586 ntBASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC009501.3-201ENST00000605001 1352 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 PADI4-202ENST00000375453 841 ntTSL 2 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AL590084.2-201ENST00000401481 382 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 Y_RNA.599-201ENST00000410489 109 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AL450344.3-201ENST00000430770 378 ntTSL 3 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 NANOGP9-201ENST00000439890 892 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 RNF2P1-201ENST00000442955 1010 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC01548-201ENST00000451980 696 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 SNORA26.10-201ENST00000516427 141 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC090888.1-201ENST00000561335 1141 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC011451.2-201ENST00000604303 598 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC011939.3-201ENST00000613686 466 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC121761.2-201ENST00000617300 689 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC009159.2-201ENST00000617603 606 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC026124.2-201ENST00000621847 656 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 AC051619.9-201ENST00000623237 597 ntBASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP3-3Q9BYR6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL135925.1-201ENST00000605920 1701 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC115619.1-201ENST00000567376 1605 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC092953.1-201ENST00000460975 543 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL157770.1-201ENST00000623049 439 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL109653.2-201ENST00000625029 1065 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 MTCO1P8-201ENST00000416914 1523 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AL008638.4-201ENST00000624792 1315 ntBASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP3-3Q9BYR6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AL356277.3-202ENST00000436672 587 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms