Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA4Q9BXL8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA4Q9BXL8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDCA4Q9BXL8 AC005703.6-201ENST00000623265 1329 ntBASIC19.25■□□□□ 0.67
CDCA4Q9BXL8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA4Q9BXL8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA4Q9BXL8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 RARRES2P1-201ENST00000474487 481 ntBASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 C17orf82-201ENST00000623772 1530 ntBASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDCA4Q9BXL8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA4Q9BXL8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 YBX1P4-201ENST00000392794 808 ntBASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 MIR4508-201ENST00000584178 70 ntBASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDCA4Q9BXL8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 AC007952.6-201ENST00000573168 2673 ntBASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 AC003957.1-201ENST00000625108 2673 ntBASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 AC010980.1-201ENST00000587192 1142 ntBASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CDCA4Q9BXL8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
CDCA4Q9BXL8 AL049796.1-201ENST00000565336 1766 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms