Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 C9orf163-202ENST00000624034 2573 ntBASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 AP004607.7-201ENST00000527152 1677 ntBASIC17.87■□□□□ 0.45
SSBP3Q9BWW4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AC079140.4-201ENST00000507448 529 ntBASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AC022517.1-201ENST00000592429 346 ntBASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 LINC00526-201ENST00000581067 1875 ntBASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSBP3Q9BWW4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSBP3Q9BWW4 AC137767.1-201ENST00000602918 1920 ntBASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSBP3Q9BWW4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSBP3Q9BWW4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSBP3Q9BWW4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSBP3Q9BWW4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 AL137784.2-201ENST00000607332 1000 ntBASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSBP3Q9BWW4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSBP3Q9BWW4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms