Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 AC027612.3-201ENST00000413684 1047 ntBASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 AC010141.3-201ENST00000456659 717 ntBASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF1Q9BSM1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 AC092666.2-201ENST00000613287 246 ntBASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 AL031602.1-201ENST00000633169 911 ntBASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCGF1Q9BSM1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.89■□□□□ 0.46
PCGF1Q9BSM1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCGF1Q9BSM1 AC007375.3-201ENST00000600936 2314 ntBASIC17.89■□□□□ 0.46
PCGF1Q9BSM1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCGF1Q9BSM1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 AC034268.1-201ENST00000441047 882 ntBASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 AL162430.1-201ENST00000480705 870 ntBASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 AC104564.3-201ENST00000582367 638 ntBASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCGF1Q9BSM1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 AC137767.1-201ENST00000602918 1920 ntBASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCGF1Q9BSM1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCGF1Q9BSM1 AC127496.7-201ENST00000625110 1798 ntBASIC17.87■□□□□ 0.45
PCGF1Q9BSM1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCGF1Q9BSM1 LINC01960-201ENST00000563759 1884 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms