Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF2Q99805 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.81■□□□□ 0.76
TM9SF2Q99805 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.8■□□□□ 0.76
TM9SF2Q99805 OR2I1P-207ENST00000453522 948 ntBASIC19.8■□□□□ 0.76
TM9SF2Q99805 MIR5787-201ENST00000611784 55 ntBASIC19.8■□□□□ 0.76
TM9SF2Q99805 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.8■□□□□ 0.76
TM9SF2Q99805 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 AC079630.1-202ENST00000618127 1840 ntBASIC19.8■□□□□ 0.76
TM9SF2Q99805 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TM9SF2Q99805 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF2Q99805 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 AC026271.2-201ENST00000428091 497 ntBASIC19.79■□□□□ 0.76
TM9SF2Q99805 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF2Q99805 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.79■□□□□ 0.76
TM9SF2Q99805 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.78■□□□□ 0.76
TM9SF2Q99805 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF2Q99805 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF2Q99805 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
TM9SF2Q99805 AC080038.3-201ENST00000623346 1952 ntBASIC19.77■□□□□ 0.75
TM9SF2Q99805 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TM9SF2Q99805 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TM9SF2Q99805 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
TM9SF2Q99805 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
TM9SF2Q99805 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 IGHV3-19-201ENST00000521488 291 ntBASIC19.76■□□□□ 0.75
TM9SF2Q99805 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 MIR6821-201ENST00000617625 74 ntBASIC19.76■□□□□ 0.75
TM9SF2Q99805 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF2Q99805 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF2Q99805 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM9SF2Q99805 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM9SF2Q99805 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms